BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028C11LP1|AL428882
(883 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1445 1744 0.0
>3x_Contig1445
Length = 8432
Score = 1744 bits (880), Expect = 0.0
Identities = 882/883 (99%)
Strand = Plus / Minus
Query: 1 gatctggatcattagagacacttcgccactggaatggtttagagaagagctattgagact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3421 gatctggatcattagagacacttcgccactggaatggtttagagaagagctattgagact 3362
Query: 61 ccaagaccggctaggtgagatcaacatctatattacccagccgacacagcaaatcgtaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3361 ccaagaccggctaggtgagatcaacatctatattacccagccgacacagcaaatcgtaga 3302
Query: 121 ttcttctgcgtcatctgctggcgaaacagactctgaaaagaaactcgacgtcaaagaatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3301 ttcttctgcgtcatctgctggcgaaacagactctgaaaagaaactcgacgtcaaagaatc 3242
Query: 181 aactcaagattgcgaaatcaattttttcaagcaattttccagaataaacttcttattcgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3241 aactcaagattgcgaaatcaattttttcaagcaattttccagaataaacttcttattcgg 3182
Query: 241 tagaccagacttacaatccttaattgtggaagatcttcacaacgctattggttctacagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3181 tagaccagacttacaatccttaattgtggaagatcttcacaacgctattggttctacagc 3122
Query: 301 aattttgagttgcggtccaggaccaatgaacgatcaaatcagagatacagtggcaaacaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3121 aattttgagttgcggtccaggaccaatgaacgatcaaatcagagatacagtggcaaacaa 3062
Query: 361 cttagatgtttccaaatacagagttgactatttcgaagaggctcaagtatggtgaaaaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3061 cttagatgtttccaaatacagagttgactatttcgaagaggctcaagtatggtgaaaaac 3002
Query: 421 actgtcctttttttttttttaagttcttaacactcagtgaccaatatatactcttcctcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3001 actgtcctttttttttttttaagttcttaacactcagtgaccaatatatactcttcctcc 2942
Query: 481 gagctcattgttgttgctgccttaatttatcacgtaagctaaaccgtgtatttattatta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2941 gagctcattgttgttgctgccttaatttatcacgtaagctaaaccgtgtatttattatta 2882
Query: 541 ttattattattattgtnatttgtcgaaaatgtatttatcagccgtgaactagacatatac 600
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2881 ttattattattattgtaatttgtcgaaaatgtatttatcagccgtgaactagacatatac 2822
Query: 601 acactacacctgattctcaacttccggccgaagcagccaaggttgtctttgcctgttgcc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2821 acactacacctgattctcaacttccggccgaagcagccaaggttgtctttgcctgttgcc 2762
Query: 661 tttttgccttatccttgttcttttttgttttcacactagtggttgattgttagtatcacg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2761 tttttgccttatccttgttcttttttgttttcacactagtggttgattgttagtatcacg 2702
Query: 721 tgactcaccgccatactaccgacattctcaaaagaaaacacccaataacgattcgcatgt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2701 tgactcaccgccatactaccgacattctcaaaagaaaacacccaataacgattcgcatgt 2642
Query: 781 atctataatctcgcactgctgtgactgagattgggggagatcgttagccgagccccaagc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2641 atctataatctcgcactgctgtgactgagattgggggagatcgttagccgagccccaagc 2582
Query: 841 ccaagtaataatatgactaagtgttcaataacatggcacagaa 883
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2581 ccaagtaataatatgactaagtgttcaataacatggcacagaa 2539
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 15,410
Number of Sequences: 1807
Number of extensions: 15410
Number of successful extensions: 580
Number of sequences better than 1.0e-20: 1
length of query: 883
length of database: 10,358,551
effective HSP length: 16
effective length of query: 867
effective length of database: 10,329,639
effective search space: 8955797013
effective search space used: 8955797013
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)